Burkholderia cenocepacia J2315, BCAL3133 (rmlC)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0008830	dTDP-4-dehydrorhamnose 3,5-epimerase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00908	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bcj01130	Biosynthesis of antibiotics	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	bcj00523	Polyketide sugar unit biosynthesis	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	bcj01100	Metabolic pathways	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	bcj00521	Streptomycin biosynthesis	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	bcj01110	Biosynthesis of secondary metabolites	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase	IPR000888	dTDP-4-dehydrorhamnose 3,5-epimerase-related	8	177	1.6E-72
TIGRFAM	TIGR01221	rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase	IPR000888	dTDP-4-dehydrorhamnose 3,5-epimerase-related	5	179	1.5E-83
Gene3D	G3DSA:2.60.120.10		IPR014710	RmlC-like jelly roll fold	3	182	1.9E-75
SUPERFAMILY	SSF51182		IPR011051	RmlC-like cupin domain superfamily	3	181	8.9E-77

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.