Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PS50045
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF02954
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0008134 | transcription factor binding |
Inferred from Sequence Model
Term mapped from: InterPro:PS50045
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:PS50045
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF02954 | Bacterial regulatory protein, Fis family | IPR002197 | DNA binding HTH domain, Fis-type | 401 | 436 | 1.2E-10 |
ProSitePatterns | PS00688 | Sigma-54 interaction domain C-terminal part signature. | IPR025944 | Sigma-54 interaction domain, conserved site | 356 | 365 | - |
Pfam | PF00158 | Sigma-54 interaction domain | IPR002078 | RNA polymerase sigma factor 54 interaction domain | 144 | 310 | 3.5E-67 |
SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 392 | 443 | 2.15E-9 | |
SUPERFAMILY | SSF52540 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 143 | 385 | 8.15E-69 | |
SUPERFAMILY | SSF52172 | IPR011006 | CheY-like superfamily | 19 | 187 | 8.62E-5 | |
ProSiteProfiles | PS50045 | Sigma-54 interaction domain profile. | IPR002078 | RNA polymerase sigma factor 54 interaction domain | 143 | 372 | 62.188 |
Gene3D | G3DSA:1.10.10.60 | 392 | 445 | 1.3E-12 | |||
Gene3D | G3DSA:1.10.8.60 | 314 | 391 | 1.7E-22 | |||
Gene3D | G3DSA:3.40.50.300 | 135 | 313 | 8.7E-62 | |||
SMART | SM00382 | IPR003593 | AAA+ ATPase domain | 163 | 306 | 3.2E-13 | |
ProSitePatterns | PS00676 | Sigma-54 interaction domain ATP-binding region B signature. | IPR025943 | Sigma-54 interaction domain, ATP-binding site 2 | 229 | 244 | - |
CDD | cd00009 | AAA | 162 | 304 | 4.15074E-23 |