Burkholderia cenocepacia J2315, BCAL2771
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0002161 | aminoacyl-tRNA editing activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF55826
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG (InterPro) | 00970 | Aminoacyl-tRNA biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| TIGRFAM | TIGR00011 | YbaK_EbsC: Cys-tRNA(Pro) deacylase | IPR004369 | Prolyl-tRNA editing protein, YbaK/EbsC | 10 | 155 | 8.3E-47 |
| Gene3D | G3DSA:3.90.960.10 | IPR036754 | YbaK/aminoacyl-tRNA synthetase-associated domain superfamily | 3 | 161 | 4.2E-44 | |
| SUPERFAMILY | SSF55826 | IPR036754 | YbaK/aminoacyl-tRNA synthetase-associated domain superfamily | 7 | 161 | 1.14E-40 | |
| CDD | cd00002 | YbaK_deacylase | IPR004369 | Prolyl-tRNA editing protein, YbaK/EbsC | 10 | 157 | 9.8855E-65 |
| Pfam | PF04073 | Aminoacyl-tRNA editing domain | IPR007214 | YbaK/aminoacyl-tRNA synthetase-associated domain | 38 | 148 | 3.1E-25 |
| PIRSF | PIRSF006181 | IPR004369 | Prolyl-tRNA editing protein, YbaK/EbsC | 5 | 162 | 7.4E-48 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.