Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PS50931
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PS50931
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
ProSiteProfiles | PS50931 | LysR-type HTH domain profile. | IPR000847 | Transcription regulator HTH, LysR | 1 | 58 | 33.409 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 87 | 291 | 9.8E-39 |
Coils | Coil | 65 | 85 | - | |||
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 3 | 62 | 1.9E-21 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 39 | 50 | 7.1E-9 |
SUPERFAMILY | SSF53850 | 88 | 296 | 1.69E-35 | |||
CDD | cd08451 | PBP2_BudR | IPR037410 | HTH-type transcriptional regulator BudR, PBP2 domain | 92 | 289 | 6.91323E-90 |
Gene3D | G3DSA:3.40.190.10 | 163 | 268 | 3.0E-53 | |||
Gene3D | G3DSA:3.40.190.10 | 90 | 286 | 3.0E-53 | |||
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 89 | 1.2E-28 | |
SUPERFAMILY | SSF46785 | IPR036390 | Winged helix DNA-binding domain superfamily | 1 | 86 | 5.9E-24 | |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 18 | 29 | 7.1E-9 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 29 | 39 | 7.1E-9 |