Burkholderia cenocepacia J2315, BCAL2302 (uvrB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02151
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006289 nucleotide-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00204
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00204
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00204
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04851
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00204
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009380 excinuclease repair complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00204
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03420 Nucleotide excision repair 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00271 Helicase conserved C-terminal domain IPR001650 Helicase, C-terminal 457 563 3.7E-18
Coils Coil 277 297 -
Pfam PF02151 UvrB/uvrC motif IPR001943 UVR domain 648 681 3.5E-7
Pfam PF12344 Ultra-violet resistance protein B IPR024759 UvrB, YAD/RRR-motif-containing domain 571 613 2.2E-21
Gene3D G3DSA:3.40.50.300 434 615 4.6E-52
TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B IPR004807 UvrABC system, subunit B 25 679 0.0
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile. IPR001650 Helicase, C-terminal 450 616 21.404
Pfam PF17757 UvrB interaction domain IPR041471 UvrB, interaction domain 179 269 2.7E-32
Coils Coil 622 670 -
Pfam PF04851 Type III restriction enzyme, res subunit IPR006935 Helicase/UvrB, N-terminal 57 158 2.5E-8
Gene3D G3DSA:4.10.860.10 630 687 9.8E-18
CDD cd17916 DEXHc_UvrB 25 433 0.0
SMART SM00487 IPR014001 Helicase superfamily 1/2, ATP-binding domain 29 445 1.5E-28
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 57 608 6.52E-37
SUPERFAMILY SSF46600 IPR036876 UVR domain superfamily 635 683 2.48E-11
ProSiteProfiles PS50151 UVR domain profile. IPR001943 UVR domain 647 682 11.884
Gene3D G3DSA:3.40.50.300 288 433 3.9E-49
Gene3D G3DSA:3.40.50.300 24 250 6.5E-71
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 24 434 6.38E-133
Hamap MF_00204 UvrABC system protein B [uvrB]. IPR004807 UvrABC system, subunit B 23 682 43.223
CDD cd18790 SF2_C_UvrB 439 609 1.44683E-112
SMART SM00490 IPR001650 Helicase, C-terminal 479 565 1.1E-18
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. IPR014001 Helicase superfamily 1/2, ATP-binding domain 46 180 14.231

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.