Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0016987 | sigma factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006352 | DNA-templated transcription, initiation |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF88946 | IPR013325 | RNA polymerase sigma factor, region 2 | 21 | 109 | 5.49E-17 | |
Pfam | PF04542 | Sigma-70 region 2 | IPR007627 | RNA polymerase sigma-70 region 2 | 26 | 91 | 5.9E-15 |
MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 213 | - | ||
Pfam | PF08281 | Sigma-70, region 4 | IPR013249 | RNA polymerase sigma factor 70, region 4 type 2 | 132 | 181 | 1.1E-17 |
TIGRFAM | TIGR02937 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family | IPR014284 | RNA polymerase sigma-70 like domain | 23 | 182 | 1.3E-27 |
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 126 | 186 | 1.2E-21 | |
SUPERFAMILY | SSF88659 | IPR013324 | RNA polymerase sigma factor, region 3/4-like | 123 | 186 | 8.22E-18 | |
ProSitePatterns | PS01063 | Sigma-70 factors ECF subfamily signature. | IPR000838 | RNA polymerase sigma factor 70, ECF, conserved site | 48 | 78 | - |
Gene3D | G3DSA:1.10.1740.10 | 11 | 94 | 2.1E-17 | |||
CDD | cd06171 | Sigma70_r4 | 129 | 181 | 2.27094E-16 |