Burkholderia cenocepacia J2315, BCAL1814

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50937
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50937
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 39 59 8.4E-9
CDD cd04788 HTH_NolA-AlbR 3 98 3.81668E-46
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 4 15 8.4E-9
SMART SM00422 IPR000551 MerR-type HTH domain 3 72 4.4E-29
Pfam PF13411 MerR HTH family regulatory protein IPR000551 MerR-type HTH domain 4 70 1.5E-17
Pfam PF07739 TipAS antibiotic-recognition domain IPR012925 TipAS antibiotic-recognition domain 147 216 3.4E-5
Gene3D G3DSA:1.10.1660.10 4 217 4.0E-35
ProSiteProfiles PS50937 MerR-type HTH domain profile. IPR000551 MerR-type HTH domain 1 71 36.276
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 15 28 8.4E-9
SUPERFAMILY SSF46955 IPR009061 Putative DNA-binding domain superfamily 3 110 5.49E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.