Burkholderia cenocepacia J2315, BCAL1443

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00862
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00862
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 140 229 2.32473E-22
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 7 118 1.6E-21
Gene3D G3DSA:3.40.50.2300 1 134 3.4E-29
CDD cd00156 REC IPR001789 Signal transduction response regulator, receiver domain 9 122 5.35392E-29
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 154 229 1.3E-16
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 135 235 2.0E-23
ProSiteProfiles PS50110 Response regulatory domain profile. IPR001789 Signal transduction response regulator, receiver domain 6 122 33.225
SUPERFAMILY SSF52172 IPR011006 CheY-like superfamily 4 140 3.42E-33
SUPERFAMILY SSF46894 IPR016032 Signal transduction response regulator, C-terminal effector 130 230 9.48E-23
SMART SM00862 IPR001867 OmpR/PhoB-type DNA-binding domain 153 229 1.6E-18
ProSiteProfiles PS51755 OmpR/PhoB-type DNA-binding domain profile. IPR001867 OmpR/PhoB-type DNA-binding domain 132 231 26.37
SMART SM00448 IPR001789 Signal transduction response regulator, receiver domain 5 118 4.4E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.