Burkholderia cenocepacia J2315, BCAL1413 (glnS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0043039 tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006418 tRNA aminoacylation for protein translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00178
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00440
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006425 glutaminyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00440
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004819 glutamine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00126
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50715
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj00970 Aminoacyl-tRNA biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00970 Aminoacyl-tRNA biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site 38 49 -
SUPERFAMILY SSF50715 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily 353 564 1.88E-74
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 64 77 1.1E-9
Hamap MF_00126 Glutamine--tRNA ligase [glnS]. IPR022861 Glutamine-tRNA ligase, bacterial 1 565 53.567
TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase IPR004514 Glutamine-tRNA synthetase 32 567 4.8E-223
Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain 32 335 1.3E-103
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 218 228 1.1E-9
Gene3D G3DSA:1.10.1160.10 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily 274 352 3.1E-30
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 49 60 1.1E-9
Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain 353 544 4.4E-56
Gene3D G3DSA:2.40.240.10 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal 353 562 1.0E-76
Gene3D G3DSA:2.40.240.10 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal 361 480 1.0E-76
Gene3D G3DSA:3.90.800.10 109 217 4.5E-103
SUPERFAMILY SSF52374 16 349 3.49E-92
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 35 47 1.1E-9
Gene3D G3DSA:3.40.50.620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 33 256 4.5E-103

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.