Burkholderia cenocepacia J2315, BCAL1318
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003723 | RNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM01012
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF03861 | ANTAR domain | IPR005561 | ANTAR domain | 366 | 416 | 8.4E-16 |
| ProSiteProfiles | PS50921 | ANTAR domain profile. | IPR005561 | ANTAR domain | 357 | 418 | 17.142 |
| Coils | Coil | 343 | 370 | - | |||
| Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 367 | 423 | 5.9E-16 | |
| Coils | Coil | 285 | 305 | - | |||
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 451 | - | ||
| SMART | SM01012 | IPR005561 | ANTAR domain | 363 | 418 | 3.8E-14 | |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 451 | - | ||
| SUPERFAMILY | SSF52172 | IPR011006 | CheY-like superfamily | 344 | 415 | 5.47E-11 | |
| Pfam | PF08376 | Nitrate and nitrite sensing | IPR013587 | Nitrate/nitrite sensing protein | 36 | 276 | 2.0E-45 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.