Burkholderia cenocepacia J2315, BCAL0957 (sucD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01019
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0048037 cofactor binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00881
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj00660 C5-Branched dibasic acid metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01200 Carbon metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01110 Biosynthesis of secondary metabolites 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00640 Propanoate metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01130 Biosynthesis of antibiotics 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01120 Microbial metabolism in diverse environments 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00020 Citrate cycle (TCA cycle) 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit IPR005810 Succinyl-CoA ligase, alpha subunit 3 293 3.7E-127
Pfam PF00549 CoA-ligase IPR005811 ATP-citrate lyase/succinyl-CoA ligase 156 271 1.3E-15
Gene3D G3DSA:3.40.50.720 2 128 7.0E-43
PRINTS PR01798 Succinyl-CoA synthase signature 182 200 2.4E-33
ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site 241 254 -
SMART SM00881 IPR003781 CoA-binding 4 103 1.1E-29
Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. IPR005810 Succinyl-CoA ligase, alpha subunit 1 293 40.593
PIRSF PIRSF001553 IPR005810 Succinyl-CoA ligase, alpha subunit 1 293 3.2E-119
PRINTS PR01798 Succinyl-CoA synthase signature 85 102 2.4E-33
Gene3D G3DSA:3.40.50.261 IPR016102 Succinyl-CoA synthetase-like 129 293 7.0E-68
PRINTS PR01798 Succinyl-CoA synthase signature 213 226 2.4E-33
ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site 157 186 -
PRINTS PR01798 Succinyl-CoA synthase signature 245 262 2.4E-33
SUPERFAMILY SSF52210 IPR016102 Succinyl-CoA synthetase-like 128 290 8.9E-53
SUPERFAMILY SSF51735 IPR036291 NAD(P)-binding domain superfamily 1 127 3.72E-35
Pfam PF02629 CoA binding domain IPR003781 CoA-binding 6 102 3.8E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.