Burkholderia cenocepacia J2315, BCAL0904 (glyQ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0005737 | cytoplasm |
Inferred from Sequence Model
Term mapped from: InterPro:PS50861
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0000166 | nucleotide binding |
Inferred from Sequence Model
Term mapped from: InterPro:PS50861
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004820 | glycine-tRNA ligase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PS50861
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006426 | glycyl-tRNA aminoacylation |
Inferred from Sequence Model
Term mapped from: InterPro:PS50861
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:PS50861
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | bcj00970 | Aminoacyl-tRNA biosynthesis | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG (InterPro) | 00970 | Aminoacyl-tRNA biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd00733 | GlyRS_alpha_core | IPR002310 | Glycine-tRNA ligase, alpha subunit | 3 | 293 | 0.0 |
| PRINTS | PR01044 | Glycyl-tRNA synthetase alpha subunit signature | IPR002310 | Glycine-tRNA ligase, alpha subunit | 254 | 270 | 3.7E-68 |
| PRINTS | PR01044 | Glycyl-tRNA synthetase alpha subunit signature | IPR002310 | Glycine-tRNA ligase, alpha subunit | 108 | 132 | 3.7E-68 |
| Gene3D | G3DSA:1.20.58.180 | 218 | 299 | 1.5E-34 | |||
| Hamap | MF_00254 | Glycine--tRNA ligase alpha subunit [glyQ]. | IPR002310 | Glycine-tRNA ligase, alpha subunit | 2 | 294 | 59.949 |
| PRINTS | PR01044 | Glycyl-tRNA synthetase alpha subunit signature | IPR002310 | Glycine-tRNA ligase, alpha subunit | 56 | 71 | 3.7E-68 |
| PRINTS | PR01044 | Glycyl-tRNA synthetase alpha subunit signature | IPR002310 | Glycine-tRNA ligase, alpha subunit | 134 | 154 | 3.7E-68 |
| PRINTS | PR01044 | Glycyl-tRNA synthetase alpha subunit signature | IPR002310 | Glycine-tRNA ligase, alpha subunit | 77 | 97 | 3.7E-68 |
| TIGRFAM | TIGR00388 | glyQ: glycine--tRNA ligase, alpha subunit | IPR002310 | Glycine-tRNA ligase, alpha subunit | 3 | 300 | 4.7E-155 |
| ProSiteProfiles | PS50861 | Heterodimeric glycyl-transfer RNA synthetases family profile. | IPR006194 | Glycine-tRNA synthetase, heterodimeric | 3 | 289 | 110.131 |
| SUPERFAMILY | SSF55681 | 3 | 293 | 5.47E-128 | |||
| Pfam | PF02091 | Glycyl-tRNA synthetase alpha subunit | IPR002310 | Glycine-tRNA ligase, alpha subunit | 4 | 293 | 1.1E-146 |
| PRINTS | PR01044 | Glycyl-tRNA synthetase alpha subunit signature | IPR002310 | Glycine-tRNA ligase, alpha subunit | 157 | 172 | 3.7E-68 |
| Gene3D | G3DSA:3.30.930.10 | 1 | 217 | 8.2E-110 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.