Burkholderia cenocepacia J2315, BCAL0829

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003905 alkylbase DNA N-glycosylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.10.300.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.10.300.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006284 base-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.10.300.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50486
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03410 Base excision repair 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase IPR003180 Methylpurine-DNA glycosylase 10 195 4.5E-53
SUPERFAMILY SSF50486 IPR011034 Formyl transferase-like, C-terminal domain superfamily 8 197 1.49E-61
Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. IPR003180 Methylpurine-DNA glycosylase 11 195 31.818
Gene3D G3DSA:3.10.300.10 IPR036995 Methylpurine-DNA glycosylase superfamily 6 199 1.3E-65
Pfam PF02245 Methylpurine-DNA glycosylase (MPG) IPR003180 Methylpurine-DNA glycosylase 13 192 1.0E-61
CDD cd00540 AAG IPR003180 Methylpurine-DNA glycosylase 13 195 3.74811E-89

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.