Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 9 | 67 | 2.2E-21 |
Gene3D | G3DSA:3.40.190.10 | 164 | 261 | 1.5E-53 | |||
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 45 | 56 | 6.2E-8 |
Gene3D | G3DSA:3.40.190.10 | 104 | 288 | 1.5E-53 | |||
ProSiteProfiles | PS50931 | LysR-type HTH domain profile. | IPR000847 | Transcription regulator HTH, LysR | 1 | 64 | 30.092 |
SUPERFAMILY | SSF46785 | IPR036390 | Winged helix DNA-binding domain superfamily | 6 | 88 | 2.31E-22 | |
SUPERFAMILY | SSF53850 | 94 | 295 | 3.08E-41 | |||
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 24 | 35 | 6.2E-8 |
CDD | cd08432 | PBP2_GcdR_TrpI_HvrB_AmpR_like | 96 | 288 | 4.76042E-75 | ||
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 8 | 97 | 7.4E-23 | |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 94 | 292 | 3.7E-38 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 35 | 45 | 6.2E-8 |