Burkholderia cenocepacia J2315, BCAL0487

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004518 nuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00633
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00633
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03410 Base excision repair 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.60.10.10 IPR036691 Endonuclease/exonuclease/phosphatase superfamily 1 256 6.0E-84
TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 251 1.4E-74
TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) IPR004808 AP endonuclease 1 2 253 7.4E-80
CDD cd10281 Nape_like_AP-endo 2 253 6.29827E-153
SUPERFAMILY SSF56219 IPR036691 Endonuclease/exonuclease/phosphatase superfamily 2 254 1.44E-76
ProSiteProfiles PS51435 AP endonucleases family 1 profile. IPR004808 AP endonuclease 1 2 255 41.973
Pfam PF03372 Endonuclease/Exonuclease/phosphatase family IPR005135 Endonuclease/exonuclease/phosphatase 6 246 4.6E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.