Burkholderia cenocepacia J2315, BCAL0407 (pcaF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019619 3,4-dihydroxybenzoate catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02430
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.47.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00098
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00362 Benzoate degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc 4-methylcatechol degradation (<i>ortho</i> cleavage) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc 3-oxoadipate degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00360 Phenylalanine metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc benzoyl-CoA degradation I (aerobic) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase IPR012793 Beta-ketoadipyl CoA thiolase 3 400 4.3E-222
Gene3D G3DSA:3.40.47.10 IPR016039 Thiolase-like 141 397 1.2E-152
CDD cd00751 thiolase IPR002155 Thiolase 5 399 0.0
Pfam PF00108 Thiolase, N-terminal domain IPR020616 Thiolase, N-terminal 5 267 1.3E-72
SUPERFAMILY SSF53901 IPR016039 Thiolase-like 3 275 9.27E-79
ProSitePatterns PS00737 Thiolases signature 2. IPR020613 Thiolase, conserved site 346 362 -
SUPERFAMILY SSF53901 IPR016039 Thiolase-like 277 399 1.11E-44
ProSitePatterns PS00099 Thiolases active site. IPR020610 Thiolase, active site 381 394 -
Gene3D G3DSA:3.40.47.10 IPR016039 Thiolase-like 6 281 1.2E-152
TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase IPR002155 Thiolase 6 398 5.0E-133
PIRSF PIRSF000429 IPR002155 Thiolase 1 400 3.7E-132
ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. IPR020615 Thiolase, acyl-enzyme intermediate active site 86 104 -
Pfam PF02803 Thiolase, C-terminal domain IPR020617 Thiolase, C-terminal 277 399 2.2E-43

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.