Burkholderia cenocepacia J2315, BCAL0292

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004113 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01940
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008664 2'-5'-RNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01940
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02834 LigT like Phosphoesterase IPR014051 Phosphoesterase, HXTX 102 169 1.2E-5
SUPERFAMILY SSF55144 IPR009097 Cyclic phosphodiesterase 7 179 3.84E-34
Gene3D G3DSA:3.90.1140.10 6 187 1.0E-31
Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. IPR004175 RNA 2',3'-cyclic phosphodiesterase 6 179 17.597
Pfam PF02834 LigT like Phosphoesterase IPR014051 Phosphoesterase, HXTX 22 90 2.6E-8
TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase IPR004175 RNA 2',3'-cyclic phosphodiesterase 7 177 4.0E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.