Burkholderia cenocepacia J2315, BCAL0258 (rpsK)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002131
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002131
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002131
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03010 Ribosome 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53137 18 133 4.12E-48
PIRSF PIRSF002131 IPR001971 Ribosomal protein S11 1 133 4.3E-56
Pfam PF00411 Ribosomal protein S11 IPR001971 Ribosomal protein S11 23 132 1.6E-50
Gene3D G3DSA:3.30.420.80 IPR036967 Ribosomal protein S11 superfamily 5 133 5.1E-55
Hamap MF_01310 30S ribosomal protein S11 [rpsK]. IPR001971 Ribosomal protein S11 3 133 33.261
ProSitePatterns PS00054 Ribosomal protein S11 signature. IPR018102 Ribosomal S11, conserved site 101 123 -
TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 IPR019981 Ribosomal protein S11, bacterial-type 14 130 1.9E-56

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.