Burkholderia cenocepacia J2315, BCAL0233 (rpsJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00361
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01049
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01049
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01049
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03010 Ribosome 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.600 IPR036838 Ribosomal protein S10 domain superfamily 1 102 2.8E-36
Pfam PF00338 Ribosomal protein S10p/S20e IPR027486 Ribosomal protein S10 domain 7 101 2.8E-34
TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 IPR001848 Ribosomal protein S10 4 101 9.8E-45
SUPERFAMILY SSF54999 IPR036838 Ribosomal protein S10 domain superfamily 5 102 1.83E-36
PRINTS PR00971 Ribosomal protein S10 family signature IPR001848 Ribosomal protein S10 40 55 4.5E-17
SMART SM01403 IPR027486 Ribosomal protein S10 domain 7 101 6.3E-55
PRINTS PR00971 Ribosomal protein S10 family signature IPR001848 Ribosomal protein S10 61 75 4.5E-17
ProSitePatterns PS00361 Ribosomal protein S10 signature. IPR018268 Ribosomal protein S10, conserved site 29 44 -
PRINTS PR00971 Ribosomal protein S10 family signature IPR001848 Ribosomal protein S10 5 18 4.5E-17
Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. IPR001848 Ribosomal protein S10 3 102 27.304

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.