Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0009432 | SOS response |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01389
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0043138 | 3'-5' DNA helicase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF09382
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00270
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006260 | DNA replication |
Inferred from Sequence Model
Term mapped from: InterPro:PF09382
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003676 | nucleic acid binding |
Inferred from Sequence Model
Term mapped from: InterPro:PS50967
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006281 | DNA repair |
Inferred from Sequence Model
Term mapped from: InterPro:PF09382
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0044237 | cellular metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:SSF47819
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0000166 | nucleotide binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF47819
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003678 | DNA helicase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01389
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006310 | DNA recombination |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00614
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0004386 | helicase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00614
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF47819
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | bcj03018 | RNA degradation | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:3.40.50.300 | 1 | 203 | 1.8E-78 | |||
SMART | SM00487 | IPR014001 | Helicase superfamily 1/2, ATP-binding domain | 13 | 213 | 5.8E-28 | |
Gene3D | G3DSA:3.40.50.300 | 204 | 341 | 1.2E-37 | |||
Pfam | PF09382 | RQC domain | IPR018982 | RQC domain | 407 | 522 | 1.1E-38 |
Pfam | PF00271 | Helicase conserved C-terminal domain | IPR001650 | Helicase, C-terminal | 239 | 331 | 1.2E-14 |
MobiDBLite | mobidb-lite | consensus disorder prediction | 520 | 535 | - | ||
CDD | cd17920 | DEXHc_RecQ | 5 | 204 | 2.4176E-103 | ||
CDD | cd18794 | SF2_C_RecQ | 205 | 341 | 4.16409E-57 | ||
ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | IPR014001 | Helicase superfamily 1/2, ATP-binding domain | 25 | 197 | 22.279 |
SMART | SM00956 | IPR018982 | RQC domain | 412 | 519 | 3.5E-52 | |
TIGRFAM | TIGR01389 | recQ: ATP-dependent DNA helicase RecQ | IPR006293 | DNA helicase, ATP-dependent, RecQ type, bacterial | 6 | 613 | 3.2E-238 |
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 342 | 529 | 2.1E-48 | |
Gene3D | G3DSA:1.10.150.80 | 546 | 614 | 9.3E-22 | |||
ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | IPR001650 | Helicase, C-terminal | 218 | 373 | 18.058 |
Pfam | PF00570 | HRDC domain | IPR002121 | HRDC domain | 546 | 612 | 3.3E-22 |
MobiDBLite | mobidb-lite | consensus disorder prediction | 520 | 540 | - | ||
TIGRFAM | TIGR00614 | recQ_fam: ATP-dependent DNA helicase, RecQ family | IPR004589 | DNA helicase, ATP-dependent, RecQ type | 6 | 466 | 3.7E-148 |
Pfam | PF16124 | RecQ zinc-binding | IPR032284 | ATP-dependent DNA helicase RecQ, zinc-binding domain | 344 | 405 | 1.8E-18 |
Pfam | PF00270 | DEAD/DEAH box helicase | IPR011545 | DEAD/DEAH box helicase domain | 21 | 180 | 2.5E-19 |
SMART | SM00490 | IPR001650 | Helicase, C-terminal | 251 | 332 | 1.6E-24 | |
SMART | SM00341 | IPR002121 | HRDC domain | 542 | 615 | 1.2E-12 | |
SUPERFAMILY | SSF47819 | IPR010997 | HRDC-like superfamily | 540 | 614 | 4.14E-21 | |
ProSiteProfiles | PS50967 | HRDC domain profile. | IPR002121 | HRDC domain | 542 | 615 | 22.949 |
SUPERFAMILY | SSF52540 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 203 | 463 | 2.12E-57 | |
SUPERFAMILY | SSF52540 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 4 | 200 | 2.62E-41 |