Burkholderia cenocepacia J2315, BCAL0225 (rplL)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0005840 | ribosome |
Inferred from Sequence Model
Term mapped from: InterPro:cd00387
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0003735 | structural constituent of ribosome |
Inferred from Sequence Model
Term mapped from: InterPro:cd00387
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006412 | translation |
Inferred from Sequence Model
Term mapped from: InterPro:cd00387
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | bcj03010 | Ribosome | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| TIGRFAM | TIGR00855 | L12: ribosomal protein bL12 | IPR000206 | Ribosomal protein L7/L12 | 1 | 124 | 1.3E-48 |
| Gene3D | G3DSA:1.20.5.710 | IPR036235 | Ribosomal protein L7/L12, oligomerisation domain superfamily | 3 | 53 | 5.7E-21 | |
| SUPERFAMILY | SSF48300 | IPR036235 | Ribosomal protein L7/L12, oligomerisation domain superfamily | 4 | 60 | 1.1E-15 | |
| Pfam | PF00542 | Ribosomal protein L7/L12 C-terminal domain | IPR013823 | Ribosomal protein L7/L12, C-terminal | 58 | 124 | 6.1E-31 |
| Gene3D | G3DSA:3.30.1390.10 | IPR014719 | Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like | 54 | 124 | 4.2E-31 | |
| Coils | Coil | 104 | 124 | - | |||
| SUPERFAMILY | SSF54736 | IPR014719 | Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like | 53 | 124 | 9.94E-25 | |
| CDD | cd00387 | Ribosomal_L7_L12 | IPR000206 | Ribosomal protein L7/L12 | 5 | 123 | 6.06955E-24 |
| Pfam | PF16320 | Ribosomal protein L7/L12 dimerisation domain | IPR008932 | Ribosomal protein L7/L12, oligomerisation | 5 | 52 | 3.0E-18 |
| Hamap | MF_00368 | 50S ribosomal protein L7/L12 [rplL]. | IPR000206 | Ribosomal protein L7/L12 | 2 | 124 | 25.356 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.