Burkholderia cenocepacia J2315, BCAL0192

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.420.20 322 401 2.7E-11
Gene3D G3DSA:2.40.30.170 242 315 2.4E-49
Gene3D G3DSA:1.10.287.470 113 190 2.4E-49
Coils Coil 242 262 -
TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit IPR006143 RND efflux pump, membrane fusion protein 62 398 2.8E-52
Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain 67 314 2.8E-24
SUPERFAMILY SSF111369 68 316 3.53E-20
Gene3D G3DSA:2.40.50.100 78 241 2.4E-49

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.