Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:1900192 | positive regulation of single-species biofilm formation | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
28733286 | Reviewed by curator |
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
ProSiteProfiles | PS50931 | LysR-type HTH domain profile. | IPR000847 | Transcription regulator HTH, LysR | 1 | 59 | 24.938 |
Coils | Coil | 69 | 89 | - | |||
Gene3D | G3DSA:3.40.190.10 | 92 | 294 | 3.0E-54 | |||
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 2 | 89 | 3.5E-26 | |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 89 | 297 | 6.7E-44 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 5 | 62 | 1.2E-18 |
CDD | cd08422 | PBP2_CrgA_like | 92 | 292 | 2.08765E-64 | ||
SUPERFAMILY | SSF46785 | IPR036390 | Winged helix DNA-binding domain superfamily | 4 | 87 | 4.22E-21 | |
Gene3D | G3DSA:3.40.190.10 | 165 | 267 | 3.0E-54 | |||
SUPERFAMILY | SSF53850 | 87 | 300 | 1.03E-43 |