Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0030254 | protein secretion by the type III secretion system |
Inferred from Sequence or Structural Similarity
Term mapped from: BGD:BPSS1610
|
ECO:0000250 sequence similarity evidence used in manual assertion |
28664152 | Reviewed by curator |
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF48452
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SMART | SM00342 | IPR018060 | DNA binding HTH domain, AraC-type | 389 | 475 | 1.8E-19 | |
Pfam | PF12833 | Helix-turn-helix domain | IPR018060 | DNA binding HTH domain, AraC-type | 395 | 476 | 1.1E-18 |
Gene3D | G3DSA:1.25.40.10 | IPR011990 | Tetratricopeptide-like helical domain superfamily | 6 | 209 | 3.5E-6 | |
ProSitePatterns | PS00041 | Bacterial regulatory proteins, araC family signature. | IPR018062 | HTH domain AraC-type, conserved site | 426 | 471 | - |
ProSiteProfiles | PS01124 | Bacterial regulatory proteins, araC family DNA-binding domain profile. | IPR018060 | DNA binding HTH domain, AraC-type | 375 | 477 | 24.341 |
Coils | Coil | 69 | 89 | - | |||
SUPERFAMILY | SSF48452 | IPR011990 | Tetratricopeptide-like helical domain superfamily | 56 | 165 | 5.9E-5 | |
Gene3D | G3DSA:1.10.10.60 | 373 | 477 | 6.3E-23 |