Burkholderia cenocepacia MC0-3, Bcenmc03_2481 (cysB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF03466	LysR substrate binding domain	IPR005119	LysR, substrate-binding	89	292	2.9E-42
Pfam	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	IPR000847	Transcription regulator HTH, LysR	4	64	2.4E-14
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	19	30	1.0E-8
SUPERFAMILY	SSF53850				91	299	2.65E-42
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	12	113	4.68E-14
Gene3D	G3DSA:3.40.190.10				167	267	6.1E-94
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	1	86	6.0E-20
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	30	40	1.0E-8
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	40	51	1.0E-8
ProSiteProfiles	PS50931	LysR-type HTH domain profile.	IPR000847	Transcription regulator HTH, LysR	1	59	22.282
CDD	cd08413	PBP2_CysB_like	IPR037423	HTH-type transcriptional regulator CysB, PBP2 domain	95	291	9.84791E-123
Gene3D	G3DSA:3.40.190.10				91	303	6.1E-94

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.