Strain |
Burkholderia cenocepacia MC0-3
GCF_000019505.1|latest |
Locus Tag |
Bcenmc03_1339
|
NCBI Locus Tag | BCENMC03_RS06820 |
Name |
ecfC
|
Replicon | chromosome 1 |
Genomic location | 1478876 - 1479385 (+ strand) |
RefSeq | WP_012328291.1 |
GI | 170732689 |
Entrez | 6123017 |
GI | 170732689 |
INSDC | ACA90514.1 |
NCBI Locus Tag | BCENMC03_RS06820 |
NCBI Old Locus Tag | Bcenmc03_1339 |
RefSeq | WP_012328291.1 |
UniParc | UPI0000E9A71E |
UniProtKB Acc | B1JZM1 |
UniProtKB ID | B1JZM1_BURCC |
UniRef100 | UniRef100_B1JZM1 |
UniRef50 | UniRef50_J7JC34 |
UniRef90 | UniRef90_J7JC34 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ECF subfamily RNA polymerase sigma-24 factor
|
Synonyms |
sigma factor 70 EcfC |
Evidence for Translation | |
Charge (pH 7) | 2.14 |
Kyte-Doolittle Hydrophobicity Value | -0.083 |
Molecular Weight (kDa) | 18835.4 |
Isoelectric Point (pI) | 8.25 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 139 genera
|
Burkholderia Ortholog Group |
BG006075 (556 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: Bcenmc03_1339
Search term: ecfC
Search term: ECF subfamily RNA polymerase sigma-24 factor
|
Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948
|