Burkholderia thailandensis E264 ATCC 700388, BTH_II1895 (clpV-4)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IGC Inferred from Genomic Context	ECO:0000177 genomic context evidence
Biological Process	GO:0033103	protein secretion by the type VI secretion system	TAS Traceable Author Statement	ECO:0000304 traceable author statement used in manual assertion	20865170	Reviewed by curator
Biological Process	GO:0019538	protein metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF81923	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF07724	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bte03070	Bacterial secretion system	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	676	694	5.8E-26
SUPERFAMILY	SSF81923		IPR036628	Clp, N-terminal domain superfamily	14	124	3.01E-12
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	709	723	5.8E-26
SMART	SM01086		IPR019489	Clp ATPase, C-terminal	769	859	5.9E-4
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	597	763	3.0E-33
SMART	SM00382		IPR003593	AAA+ ATPase domain	223	368	2.7E-6
SMART	SM00382		IPR003593	AAA+ ATPase domain	598	742	2.8E-8
CDD	cd00009	AAA			595	723	9.80774E-15
CDD	cd00009	AAA			206	359	3.61433E-16
TIGRFAM	TIGR03345	VI_ClpV1: type VI secretion ATPase, ClpV1 family	IPR017729	Type VI secretion system, ATPase ClpV1	12	852	1.4E-280
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	602	620	5.8E-26
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	769	842	7.4E-6
Pfam	PF02861	Clp amino terminal domain, pathogenicity island component	IPR004176	Clp, N-terminal	23	72	7.0E-5
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	228	333	2.7E-8
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	368	447	1.5E-25
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	184	447	1.89E-60
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	547	839	1.41E-58
MobiDBLite	mobidb-lite	consensus disorder prediction			877	947	-
Gene3D	G3DSA:1.10.1780.10		IPR036628	Clp, N-terminal domain superfamily	1	159	7.7E-24
Gene3D	G3DSA:3.40.50.300				373	545	1.3E-31
Gene3D	G3DSA:3.40.50.300				551	766	6.4E-61
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	647	665	5.8E-26
ProSitePatterns	PS00870	Chaperonins clpA/B signature 1.	IPR018368	ClpA/B, conserved site 1	319	331	-
MobiDBLite	mobidb-lite	consensus disorder prediction			899	930	-
Gene3D	G3DSA:3.40.50.300				183	372	2.4E-58
MobiDBLite	mobidb-lite	consensus disorder prediction			933	947	-

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.