Burkholderia thailandensis E264 ATCC 700388, BTH_II0830 (bsaQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00949
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01399
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00949
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00949
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015031 protein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01399
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00949
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01399
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015031 protein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01399
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bte03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 191 208 1.9E-57
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 80 99 1.9E-57
Gene3D G3DSA:1.10.490.80 IPR042196 FHIPEP, domain 4 604 702 3.0E-29
PIRSF PIRSF005419 IPR001712 Type III secretion system FHIPEP 10 702 5.9E-212
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 242 256 1.9E-57
TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family IPR006302 Type III secretion protein HrcV 24 702 2.4E-246
Gene3D G3DSA:1.10.8.540 IPR042193 FHIPEP, domain 3 514 603 2.4E-32
Coils Coil 516 536 -
Pfam PF00771 FHIPEP family IPR001712 Type III secretion system FHIPEP 36 694 1.1E-214
Gene3D G3DSA:3.40.5.40 445 493 6.4E-30
Coils Coil 702 702 -
ProSitePatterns PS00994 Bacterial export FHIPEP family signature. IPR025505 FHIPEP conserved site 147 170 -
Gene3D G3DSA:3.40.30.60 IPR042194 FHIPEP, domain 1 373 512 6.4E-30
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 161 179 1.9E-57
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 43 56 1.9E-57
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 142 158 1.9E-57

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.