Burkholderia thailandensis E264 ATCC 700388, BTH_II0264 (clpV-6)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IGC Inferred from Genomic Context	ECO:0000177 genomic context evidence
Biological Process	GO:0033103	protein secretion by the type VI secretion system	TAS Traceable Author Statement	ECO:0000304 traceable author statement used in manual assertion	20865170	Reviewed by curator
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PS00870	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0019538	protein metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:1.10.1780.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bte03070	Bacterial secretion system	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	662	680	1.0E-31
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	227	328	7.0E-9
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	724	738	1.0E-31
Gene3D	G3DSA:3.40.50.300				368	560	2.2E-45
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	184	505	2.88E-70
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	613	779	1.4E-37
TIGRFAM	TIGR03345	VI_ClpV1: type VI secretion ATPase, ClpV1 family	IPR017729	Type VI secretion system, ATPase ClpV1	14	869	0.0
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	691	709	1.0E-31
Gene3D	G3DSA:1.10.8.60				785	883	4.8E-12
CDD	cd00009	AAA			205	360	1.3269E-16
Coils	Coil				436	456	-
Gene3D	G3DSA:3.40.50.300				566	783	1.7E-64
Gene3D	G3DSA:1.10.1780.10		IPR036628	Clp, N-terminal domain superfamily	1	160	6.2E-40
CDD	cd00009	AAA			597	740	3.25715E-16
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	617	635	1.0E-31
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	369	456	1.0E-28
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	785	859	4.5E-12
SMART	SM01086		IPR019489	Clp ATPase, C-terminal	785	877	4.0E-14
SMART	SM00382		IPR003593	AAA+ ATPase domain	613	773	4.6E-11
Gene3D	G3DSA:3.40.50.300				175	366	2.6E-61
SUPERFAMILY	SSF81923		IPR036628	Clp, N-terminal domain superfamily	13	127	4.12E-17
ProSitePatterns	PS00870	Chaperonins clpA/B signature 1.	IPR018368	ClpA/B, conserved site 1	318	330	-
Coils	Coil				519	539	-
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	562	878	6.33E-65
SMART	SM00382		IPR003593	AAA+ ATPase domain	222	367	1.2E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.