Burkholderia thailandensis E264 ATCC 700388, BTH_II0140 (clpV-2)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0033103	protein secretion by the type VI secretion system	TAS Traceable Author Statement	ECO:0000304 traceable author statement used in manual assertion	20865170	Reviewed by curator
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IGC Inferred from Genomic Context	ECO:0000177 genomic context evidence
Biological Process	GO:0019538	protein metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:1.10.1780.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00004	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
ProSitePatterns	PS00870	Chaperonins clpA/B signature 1.	IPR018368	ClpA/B, conserved site 1	360	372	-
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	594	884	3.52E-62
Gene3D	G3DSA:1.10.1780.10		IPR036628	Clp, N-terminal domain superfamily	37	197	9.7E-42
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	269	400	1.9E-11
SMART	SM01086		IPR019489	Clp ATPase, C-terminal	817	909	2.4E-9
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	226	547	7.94E-71
Gene3D	G3DSA:1.10.8.60				817	908	4.3E-11
Gene3D	G3DSA:3.40.50.300				410	592	6.3E-37
Coils	Coil				478	498	-
SMART	SM00382		IPR003593	AAA+ ATPase domain	264	405	9.5E-11
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	409	499	5.9E-28
CDD	cd00009	AAA			619	767	1.61289E-16
TIGRFAM	TIGR03345	VI_ClpV1: type VI secretion ATPase, ClpV1 family	IPR017729	Type VI secretion system, ATPase ClpV1	51	901	0.0
Gene3D	G3DSA:3.40.50.300				216	408	1.6E-62
Gene3D	G3DSA:3.40.50.300				598	814	2.7E-63
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	694	712	5.3E-32
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	756	770	5.3E-32
CDD	cd00009	AAA			247	400	1.19469E-19
SUPERFAMILY	SSF81923		IPR036628	Clp, N-terminal domain superfamily	52	167	1.59E-17
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	649	667	5.3E-32
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	723	741	5.3E-32
SMART	SM00382		IPR003593	AAA+ ATPase domain	645	787	1.4E-9
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	645	810	3.9E-36
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	817	890	2.3E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.