Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PS50931
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PS50931
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 39 | 50 | 1.7E-10 |
SUPERFAMILY | SSF46785 | IPR036390 | Winged helix DNA-binding domain superfamily | 1 | 87 | 7.6E-25 | |
SUPERFAMILY | SSF53850 | 88 | 297 | 5.57E-29 | |||
Coils | Coil | 68 | 88 | - | |||
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 4 | 62 | 4.8E-22 |
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 90 | 4.2E-26 | |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 29 | 39 | 1.7E-10 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 18 | 29 | 1.7E-10 |
ProSiteProfiles | PS50931 | LysR-type HTH domain profile. | IPR000847 | Transcription regulator HTH, LysR | 1 | 58 | 35.424 |
Gene3D | G3DSA:3.40.190.290 | 91 | 298 | 4.5E-25 | |||
CDD | cd05466 | PBP2_LTTR_substrate | 92 | 293 | 2.66786E-25 | ||
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 87 | 297 | 1.7E-27 |