Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003676 | nucleic acid binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46946
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003735 | structural constituent of ribosome |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03631
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006412 | translation |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03631
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0005840 | ribosome |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03631
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003723 | RNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03631
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | bps03010 | Ribosome | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:1.10.8.50 | 1 | 71 | 4.8E-26 | |||
TIGRFAM | TIGR03631 | uS13_bact: ribosomal protein uS13 | IPR019980 | Ribosomal protein S13, bacterial-type | 3 | 114 | 1.1E-52 |
Pfam | PF00416 | Ribosomal protein S13/S18 | IPR001892 | Ribosomal protein S13 | 3 | 108 | 3.7E-31 |
Hamap | MF_01315 | 30S ribosomal protein S13 [rpsM]. | IPR001892 | Ribosomal protein S13 | 1 | 118 | 26.906 |
PIRSF | PIRSF002134 | IPR001892 | Ribosomal protein S13 | 1 | 121 | 1.2E-42 | |
ProSitePatterns | PS00646 | Ribosomal protein S13 signature. | IPR018269 | Ribosomal protein S13, conserved site | 87 | 100 | - |
Gene3D | G3DSA:4.10.910.10 | IPR027437 | 30s ribosomal protein S13, C-terminal | 72 | 117 | 3.8E-25 | |
SUPERFAMILY | SSF46946 | IPR010979 | Ribosomal protein S13-like, H2TH | 2 | 114 | 2.18E-44 | |
MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 121 | - | ||
ProSiteProfiles | PS50159 | Ribosomal protein S13 family profile. | IPR001892 | Ribosomal protein S13 | 4 | 111 | 38.037 |