Burkholderia pseudomallei K96243, BPSL3073 (prfA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016149 translation release factor activity, codon specific
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00019
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003747 translation release factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00472
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006415 translational termination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00019
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.1660 112 342 2.3E-97
SMART SM00937 IPR005139 Peptide chain release factor 63 178 5.9E-62
SUPERFAMILY SSF75620 12 353 1.2E-134
Pfam PF03462 PCRF domain IPR005139 Peptide chain release factor 13 203 1.6E-69
Coils Coil 2 29 -
Hamap MF_00093 Peptide chain release factor 1 [prfA]. IPR004373 Peptide chain release factor 1 5 357 40.821
ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. IPR000352 Peptide chain release factor class I 228 244 -
Pfam PF00472 RF-1 domain IPR000352 Peptide chain release factor class I 214 321 3.6E-42
TIGRFAM TIGR00019 prfA: peptide chain release factor 1 IPR004373 Peptide chain release factor 1 1 356 4.2E-162
Coils Coil 75 95 -
Gene3D G3DSA:3.30.160.20 210 297 2.3E-97

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.