Burkholderia pseudomallei K96243, BPSL2998 (proS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004827 proline-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00409
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006418 tRNA aminoacylation for protein translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00587
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006433 prolyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00409
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0002161 aminoacyl-tRNA editing activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04073
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00587
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00587
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00409
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00587
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps00970 Aminoacyl-tRNA biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00970 Aminoacyl-tRNA biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01046 Prolyl-tRNA synthetase signature IPR002316 Proline-tRNA ligase, class IIa 144 155 8.1E-19
Gene3D G3DSA:3.40.50.800 IPR036621 Anticodon-binding domain superfamily 4 556 6.2E-241
TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type 1 566 9.3E-235
SUPERFAMILY SSF55826 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily 218 392 2.49E-36
Pfam PF03129 Anticodon binding domain IPR004154 Anticodon-binding 478 570 4.3E-16
SUPERFAMILY SSF55681 10 479 4.02E-103
PIRSF PIRSF001535 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 1 576 9.1E-275
Hamap MF_01569 Proline--tRNA ligase [proS]. IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 1 573 42.136
Gene3D G3DSA:3.30.930.10 11 467 6.2E-241
Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) 95 461 8.8E-47
Gene3D G3DSA:3.90.960.10 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily 240 391 6.2E-241
ProSiteProfiles PS50862 Aminoacyl-transfer RNA synthetases class-II family profile. IPR006195 Aminoacyl-tRNA synthetase, class II 33 470 17.35
CDD cd00861 ProRS_anticodon_short 475 560 6.12199E-31
PRINTS PR01046 Prolyl-tRNA synthetase signature IPR002316 Proline-tRNA ligase, class IIa 104 115 8.1E-19
SUPERFAMILY SSF52954 465 572 9.65E-31
Pfam PF04073 Aminoacyl-tRNA editing domain IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain 257 381 2.9E-27
PRINTS PR01046 Prolyl-tRNA synthetase signature IPR002316 Proline-tRNA ligase, class IIa 68 86 8.1E-19
CDD cd04334 ProRS-INS 226 389 1.26156E-71
PRINTS PR01046 Prolyl-tRNA synthetase signature IPR002316 Proline-tRNA ligase, class IIa 134 142 8.1E-19
CDD cd00779 ProRS_core_prok IPR033730 Prokaryote proline-tRNA ligase core domain 17 460 2.35178E-147

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.