Burkholderia pseudomallei K96243, BPSL2952 (gapA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00078
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051287 NAD binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01534
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00078
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006006 glucose metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01534
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050661 NADP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01534
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc glycolysis IV (plant cytosol) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc superpathway of glucose and xylose degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps01230 Biosynthesis of amino acids 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01110 Biosynthesis of secondary metabolites 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc Entner-Doudoroff pathway I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc glycerol degradation to butanol InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps01120 Microbial metabolism in diverse environments 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01200 Carbon metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps00710 Carbon fixation in photosynthetic organisms 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00710 Carbon fixation in photosynthetic organisms InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps00010 Glycolysis / Gluconeogenesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc glycolysis II (from fructose 6-phosphate) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps01130 Biosynthesis of antibiotics 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00010 Glycolysis / Gluconeogenesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family 176 192 2.4E-40
PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family 272 287 2.4E-40
TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I 4 327 1.6E-129
SUPERFAMILY SSF55347 154 315 4.46E-69
Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain 3 106 8.2E-39
PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family 149 167 2.4E-40
SMART SM00846 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain 3 155 1.2E-97
SUPERFAMILY SSF51735 IPR036291 NAD(P)-binding domain superfamily 1 181 3.09E-65
Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain 160 315 5.2E-63
Gene3D G3DSA:3.40.50.720 4 327 4.7E-152
PIRSF PIRSF000149 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family 1 336 1.9E-138
Gene3D G3DSA:3.30.360.10 154 317 4.7E-152
PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family 232 249 2.4E-40
ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site 153 160 -
PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family 112 125 2.4E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.