Burkholderia pseudomallei K96243, BPSL2628 (nusB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01029
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006353 DNA-templated transcription, termination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01951
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01029
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00073 Transcription antitermination protein NusB [nusB]. IPR011605 NusB antitermination factor 4 135 21.31
Gene3D G3DSA:1.10.940.10 IPR035926 NusB-like superfamily 1 139 4.2E-42
TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB IPR011605 NusB antitermination factor 6 133 3.4E-38
SUPERFAMILY SSF48013 IPR035926 NusB-like superfamily 3 135 2.62E-40
Pfam PF01029 NusB family IPR006027 NusB/RsmB/TIM44 8 131 3.8E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.