Burkholderia cenocepacia AU 1054, BCEN_RS28780

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit IPR006143 RND efflux pump, membrane fusion protein 37 373 2.5E-77
MobiDBLite mobidb-lite consensus disorder prediction 383 412 -
MobiDBLite mobidb-lite consensus disorder prediction 390 412 -
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 6.0
Gene3D G3DSA:2.40.30.170 49 301 2.5E-106
Gene3D G3DSA:2.40.420.20 302 371 2.5E-106
Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain 62 291 6.7E-11
Gene3D G3DSA:2.40.50.100 61 205 2.5E-106
Gene3D G3DSA:1.10.287.470 96 169 2.5E-106
SUPERFAMILY SSF111369 51 298 7.06E-83

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.