Burkholderia cenocepacia AU 1054, BCEN_RS25905

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0071705 nitrogen compound transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01096
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0030288 outer membrane-bounded periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01096
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter 12 252 1.9E-79
SMART SM00062 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 26 255 4.0E-73
CDD cd13703 PBP2_HisJ_LAO 26 252 2.54459E-125
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 27 253 1.4E-60
Gene3D G3DSA:3.40.190.10 112 212 1.4E-77
ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. IPR018313 Solute-binding protein family 3, conserved site 49 62 -
Gene3D G3DSA:3.40.190.10 29 251 1.4E-77
SUPERFAMILY SSF53850 1 256 4.45E-66

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.