Burkholderia cenocepacia AU 1054, BCEN_RS24315

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 1 58 9.8E-21
CDD cd00090 HTH_ARSR IPR011991 ArsR-like helix-turn-helix domain 6 54 6.36133E-6
SUPERFAMILY SSF54909 IPR011008 Dimeric alpha-beta barrel 66 153 4.16E-20
Pfam PF01037 Lrp/AsnC ligand binding domain IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain 71 145 5.4E-21
Gene3D G3DSA:3.30.70.920 59 142 2.0E-22
ProSiteProfiles PS50956 AsnC-type HTH domain profile. IPR000485 AsnC-type HTH domain 5 66 32.592
Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 1.4E-17
SMART SM00344 IPR019888 Transcription regulator AsnC-type 5 114 1.6E-35
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 32 51 9.2E-14
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 21 32 9.2E-14
ProSitePatterns PS00519 AsnC-type HTH domain signature. IPR019885 Transcription regulator HTH, AsnC-type, conserved site 23 49 -
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 5 21 9.2E-14
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 4 64 6.12E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.