Burkholderia cenocepacia AU 1054, BCEN_RS13190

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015276 ligand-gated ion channel activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00062 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 38 259 6.7E-74
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 39 257 1.8E-66
Gene3D G3DSA:3.40.190.10 122 221 1.2E-69
SUPERFAMILY SSF53850 2 260 5.22E-72
SMART SM00079 IPR001320 Ionotropic glutamate receptor 38 258 9.9E-4
Gene3D G3DSA:3.40.190.10 36 256 1.2E-69

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.