Burkholderia cenocepacia AU 1054, BCEN_RS12395
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006281 | DNA repair |
Inferred from Sequence Model
Term mapped from: InterPro:PS51435
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004518 | nuclease activity |
Inferred from Sequence Model
Term mapped from: InterPro:PS51435
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| TIGRFAM | TIGR00633 | xth: exodeoxyribonuclease III (xth) | IPR004808 | AP endonuclease 1 | 2 | 253 | 2.0E-79 |
| TIGRFAM | TIGR00195 | exoDNase_III: exodeoxyribonuclease III | 2 | 251 | 3.7E-74 | ||
| Gene3D | G3DSA:3.60.10.10 | IPR036691 | Endonuclease/exonuclease/phosphatase superfamily | 1 | 256 | 1.1E-82 | |
| CDD | cd10281 | Nape_like_AP-endo | 2 | 253 | 6.01985E-151 | ||
| ProSiteProfiles | PS51435 | AP endonucleases family 1 profile. | IPR004808 | AP endonuclease 1 | 2 | 255 | 41.302 |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | IPR005135 | Endonuclease/exonuclease/phosphatase | 6 | 246 | 4.0E-16 |
| SUPERFAMILY | SSF56219 | IPR036691 | Endonuclease/exonuclease/phosphatase superfamily | 2 | 254 | 2.36E-75 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.