Burkholderia cenocepacia AU 1054, BCEN_RS11780
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0008033 | tRNA processing |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004976
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52402 | 36 | 254 | 9.08E-56 | |||
| Hamap | MF_01850 | tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. | IPR012089 | tRNA-cytidine(32) 2-sulfurtransferase | 29 | 290 | 56.778 |
| CDD | cd01993 | Alpha_ANH_like_II | 60 | 235 | 8.42454E-74 | ||
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | ||
| Gene3D | G3DSA:3.40.50.620 | IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | 18 | 282 | 5.6E-52 | |
| PIRSF | PIRSF004976 | IPR035107 | tRNA thiolation protein, TtcA/Ctu1 type | 15 | 294 | 6.3E-78 | |
| Pfam | PF01171 | PP-loop family | IPR011063 | tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal | 60 | 222 | 3.4E-16 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.