Burkholderia cenocepacia AU 1054, BCEN_RS11695

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.920 65 148 3.6E-18
Pfam PF13404 AsnC-type helix-turn-helix domain IPR000485 AsnC-type HTH domain 13 54 1.7E-13
ProSitePatterns PS00519 AsnC-type HTH domain signature. IPR019885 Transcription regulator HTH, AsnC-type, conserved site 31 57 -
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 13 29 1.2E-14
SUPERFAMILY SSF54909 IPR011008 Dimeric alpha-beta barrel 75 148 6.44E-14
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 40 59 1.2E-14
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 5 64 9.1E-19
SMART SM00344 IPR019888 Transcription regulator AsnC-type 13 119 3.9E-31
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 12 73 1.12E-15
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 29 40 1.2E-14
Pfam PF01037 Lrp/AsnC ligand binding domain IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain 79 145 1.2E-11
ProSiteProfiles PS50956 AsnC-type HTH domain profile. IPR000485 AsnC-type HTH domain 13 74 35.427

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.