Burkholderia cenocepacia AU 1054, BCEN_RS11125

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0022900 electron transport chain
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50999
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004129 cytochrome-c oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00116
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00116
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02866
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50999
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005507 copper ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00078
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01166 Cytochrome c oxidase subunit II signature 113 133 2.1E-36
Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain IPR002429 Cytochrome c oxidase subunit II-like C-terminal 139 264 3.3E-33
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 435 508 1.8E-13
TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II IPR014222 Cytochrome c oxidase, subunit II 52 274 2.2E-57
SUPERFAMILY SSF103088 IPR036737 OmpA-like domain superfamily 431 528 1.2E-18
ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. IPR001505 Copper centre Cu(A) 210 258 -
ProSiteProfiles PS50857 Cytochrome oxidase subunit II copper A binding domain profile. IPR002429 Cytochrome c oxidase subunit II-like C-terminal 136 276 37.347
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 481 497 8.3E-6
Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain IPR011759 Cytochrome C oxidase subunit II, transmembrane domain 44 124 3.2E-17
SUPERFAMILY SSF81464 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily 40 133 4.25E-28
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 298 367 2.1E-11
PRINTS PR01166 Cytochrome c oxidase subunit II signature 209 229 2.1E-36
Gene3D G3DSA:2.60.40.420 IPR008972 Cupredoxin 135 274 1.3E-77
ProSiteProfiles PS51123 OmpA-like domain profile. IPR006665 OmpA-like domain 423 532 24.407
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 436 458 8.3E-6
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 433 528 1.91512E-15
PRINTS PR01166 Cytochrome c oxidase subunit II signature 247 264 2.1E-36
SUPERFAMILY SSF49503 IPR008972 Cupredoxin 131 320 4.26E-49
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 466 481 8.3E-6
ProSiteProfiles PS51007 Cytochrome c family profile. IPR009056 Cytochrome c-like domain 296 372 9.653
Gene3D G3DSA:3.30.1330.60 IPR036737 OmpA-like domain superfamily 420 529 1.2E-19
SUPERFAMILY SSF46626 IPR036909 Cytochrome c-like domain superfamily 278 381 7.45E-23
PRINTS PR01166 Cytochrome c oxidase subunit II signature 101 113 2.1E-36
PRINTS PR01166 Cytochrome c oxidase subunit II signature 185 206 2.1E-36
ProSiteProfiles PS50999 Cytochrome oxidase subunit II transmembrane region profile. IPR011759 Cytochrome C oxidase subunit II, transmembrane domain 40 135 17.595
Gene3D G3DSA:1.10.287.90 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily 63 134 1.3E-77
PRINTS PR01166 Cytochrome c oxidase subunit II signature 135 154 2.1E-36
Gene3D G3DSA:1.10.760.10 IPR036909 Cytochrome c-like domain superfamily 279 400 4.1E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.