Burkholderia cenocepacia AU 1054, BCEN_RS10865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00633
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0019104 DNA N-glycosylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01084
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006284 base-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00056
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF55811
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF48150 IPR011257 DNA glycosylase 17 242 1.73E-72
CDD cd00056 ENDO3c IPR003265 HhH-GPD domain 45 206 3.50215E-50
Gene3D G3DSA:3.90.79.10 243 365 6.0E-15
Gene3D G3DSA:1.10.1670.10 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal 23 229 3.9E-86
SMART SM00478 IPR003265 HhH-GPD domain 53 208 1.4E-46
ProSitePatterns PS01155 Endonuclease III family signature. IPR004036 Endonuclease III-like, conserved site-2 116 145 -
TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase IPR005760 A/G-specific adenine glycosylase MutY 20 291 2.6E-105
Pfam PF14815 NUDIX domain IPR029119 MutY, C-terminal 252 362 3.2E-25
Pfam PF00633 Helix-hairpin-helix motif IPR000445 Helix-hairpin-helix motif 113 142 8.5E-9
Gene3D G3DSA:1.10.340.30 35 146 3.9E-86
Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein IPR003265 HhH-GPD domain 50 181 2.6E-20
CDD cd03431 DNA_Glycosylase_C IPR029119 MutY, C-terminal 249 363 6.6037E-24
SUPERFAMILY SSF55811 IPR015797 NUDIX hydrolase-like domain superfamily 238 363 4.31E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.