Burkholderia cenocepacia AU 1054, BCEN_RS10825

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0001530 lipopolysaccharide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01914
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0042597 periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01914
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015920 lipopolysaccharide transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01914
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. IPR014340 Lipopolysaccharide export system protein LptA 19 195 26.541
MobiDBLite mobidb-lite consensus disorder prediction 191 221 -
TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA IPR014340 Lipopolysaccharide export system protein LptA 39 195 6.2E-44
Gene3D G3DSA:2.60.450.10 41 197 9.8E-44
MobiDBLite mobidb-lite consensus disorder prediction 207 221 -
Pfam PF03968 OstA-like protein IPR005653 Organic solvent tolerance-like, N-terminal 49 168 2.8E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.