Burkholderia cenocepacia AU 1054, BCEN_RS10160

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00862 IPR001867 OmpR/PhoB-type DNA-binding domain 145 218 8.5E-23
SUPERFAMILY SSF52172 IPR011006 CheY-like superfamily 1 121 4.13E-37
Gene3D G3DSA:3.40.50.2300 1 121 1.4E-39
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 124 228 1.5E-26
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 148 218 1.0E-20
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 132 218 2.44636E-25
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 3 112 4.1E-28
CDD cd00156 REC IPR001789 Signal transduction response regulator, receiver domain 4 115 5.80771E-37
SMART SM00448 IPR001789 Signal transduction response regulator, receiver domain 1 112 2.3E-38
ProSiteProfiles PS51755 OmpR/PhoB-type DNA-binding domain profile. IPR001867 OmpR/PhoB-type DNA-binding domain 124 220 30.776
SUPERFAMILY SSF46894 IPR016032 Signal transduction response regulator, C-terminal effector 119 219 1.28E-24
ProSiteProfiles PS50110 Response regulatory domain profile. IPR001789 Signal transduction response regulator, receiver domain 2 116 42.133

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.