Burkholderia cenocepacia AU 1054, BCEN_RS04735

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00133
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006418 tRNA aminoacylation for protein translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50677
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0002161 aminoacyl-tRNA editing activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50677
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004832 valine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00986
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00986
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006438 valyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00986
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00986
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF10458
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00970 Aminoacyl-tRNA biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF10458 Valyl tRNA synthetase tRNA binding arm IPR019499 Valyl-tRNA synthetase, tRNA-binding arm 889 953 7.9E-22
SUPERFAMILY SSF46589 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm 889 953 3.61E-18
CDD cd07962 Anticodon_Ia_Val IPR033705 Valyl tRNA synthetase, anticodon-binding domain 618 764 2.27368E-62
Gene3D G3DSA:3.90.740.10 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 202 339 1.8E-52
SUPERFAMILY SSF52374 6 629 4.16E-133
PRINTS PR00986 Valyl-tRNA synthetase signature IPR002303 Valine-tRNA ligase 234 251 2.2E-35
ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site 47 58 -
Pfam PF08264 Anticodon-binding domain of tRNA IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding 674 829 5.6E-39
Coils Coil 929 949 -
Gene3D G3DSA:3.40.50.620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 7 201 1.8E-60
PRINTS PR00986 Valyl-tRNA synthetase signature IPR002303 Valine-tRNA ligase 463 484 2.2E-35
Gene3D G3DSA:1.10.730.10 573 824 1.5E-65
PRINTS PR00986 Valyl-tRNA synthetase signature IPR002303 Valine-tRNA ligase 350 363 2.2E-35
Hamap MF_02004 Valine--tRNA ligase [valS]. IPR002303 Valine-tRNA ligase 6 954 15.697
Gene3D G3DSA:1.10.287.380 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily 882 954 4.0E-18
Gene3D G3DSA:3.40.50.620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 340 568 1.1E-61
PRINTS PR00986 Valyl-tRNA synthetase signature IPR002303 Valine-tRNA ligase 494 512 2.2E-35
Coils Coil 894 914 -
TIGRFAM TIGR00422 valS: valine--tRNA ligase IPR002303 Valine-tRNA ligase 7 935 0.0
CDD cd00817 ValRS_core 38 618 0.0
SUPERFAMILY SSF47323 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding 630 903 3.18E-59
PRINTS PR00986 Valyl-tRNA synthetase signature IPR002303 Valine-tRNA ligase 40 51 2.2E-35
SUPERFAMILY SSF50677 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 195 346 4.84E-62
Pfam PF00133 tRNA synthetases class I (I, L, M and V) IPR002300 Aminoacyl-tRNA synthetase, class Ia 22 619 3.2E-205

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.