Burkholderia cenocepacia AU 1054, BCEN_RS04710

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 3 114 1.6E-21
SMART SM00862 IPR001867 OmpR/PhoB-type DNA-binding domain 149 225 1.6E-18
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 150 225 1.2E-16
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 132 231 2.0E-23
Gene3D G3DSA:3.40.50.2300 1 131 5.5E-29
SUPERFAMILY SSF52172 IPR011006 CheY-like superfamily 1 136 9.82E-33
ProSiteProfiles PS51755 OmpR/PhoB-type DNA-binding domain profile. IPR001867 OmpR/PhoB-type DNA-binding domain 128 227 26.37
CDD cd00156 REC IPR001789 Signal transduction response regulator, receiver domain 5 118 4.56735E-29
ProSiteProfiles PS50110 Response regulatory domain profile. IPR001789 Signal transduction response regulator, receiver domain 2 118 33.225
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 136 225 2.41437E-22
SMART SM00448 IPR001789 Signal transduction response regulator, receiver domain 1 114 4.4E-30
SUPERFAMILY SSF46894 IPR016032 Signal transduction response regulator, C-terminal effector 126 226 8.08E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.