Burkholderia cenocepacia AU 1054, BCEN_RS04685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0097367 carbohydrate derivative binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51464
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51071
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51071
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:1901135 carbohydrate derivative metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51464
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.10490 112 283 3.6E-31
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 14 88 8.96E-17
CDD cd05013 SIS_RpiR IPR035472 RpiR-like, SIS domain 138 272 2.77793E-27
SUPERFAMILY SSF53697 114 276 2.83E-26
Pfam PF01380 SIS domain IPR001347 Sugar isomerase (SIS) 146 271 1.2E-23
Pfam PF01418 Helix-turn-helix domain, rpiR family IPR000281 Helix-turn-helix protein RpiR 15 86 4.6E-11
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 9 87 5.5E-14
ProSiteProfiles PS51071 RpiR-type HTH domain profile. IPR000281 Helix-turn-helix protein RpiR 12 88 15.303
ProSiteProfiles PS51464 SIS domain profile. IPR001347 Sugar isomerase (SIS) 142 279 14.673

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.